Industry-standard, pre-designed panels for targeted genotyping by sequencing
LGC Biosearch Technologies' industry standard, pre-designed panels utilise well-characterised, industry-standard content to provide fast access to the targeted GBS technology - Amp-Seq One & Flex-Seq - at a lower cost. Panels can be easily and affordably modified over time, allowing for changes in marker density as well as the addition or removal of markers. This enables flexible and cost-effective customisation of the ideal panel for your breeding programme.
- Contains 340 ISAG markers
- Contains 199 SNPs from ISAG panel (parentage)
- Contains four additional traits
- A2/A2
- Coat color (Red/Black/Wild)
- Pompes E7
- Horned/Polled (Celtic and Friesian)
120,000 reads per sample
(based on 200X amplicon coverage rounded up)
Suitable for QC and parentage applications/
Built-in overlap with the Illumina MaizeSNP50 BeadChip: C-Trait and G-Trait sets/
See the corresponding technical documentation for more information
250,000 reads per sample
(based on 200X amplicon coverage rounded up)
Suitable for QC, reference, and parentage applications/
Designed for use with a wide range of germplasm, inbred, and hybrid material/
Built-in overlap with the Illumina MaizeSNP50 BeadChip
1,100,000 reads per sample
(based on 200X amplicon coverage rounded up)
- Contains 199 SNPs from ISAG panel (parentage)
50,000 reads per sample
(based on 200X amplicon coverage rounded up)
Please enquire below
Please enquire below
650,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
5,300,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
650,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
1,350,000 reads per sample
(based on 200X amplicon coverage)
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4,600,000 reads per sample
(based on 200X amplicon coverage)
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Please enquire below
4,100,000 reads per sample
(based on 200X amplicon coverage)
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Please enquire below
3,300,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
2,300,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
5,300,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
800,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
3,300,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
1,100,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Please enquire below
650,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Includes polyploid calling
4,100,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
Includes polyploid calling
3,300,000 reads per sample
(based on 200X amplicon coverage)
Please enquire below
| Panel name | Species | Marker number | Marker details | Number of reads per sample | More information | Order by product no. |
| Pre-designed panels for Amp-Seq One kits | ||||||
| Amp-Seq One industry standard bovine ICAR+ 0.6K panel* | Bovine | 565 |
- Contains 340 ISAG markers - Contains 199 SNPs from ISAG panel (parentage) - Contains four additional traits - A2/A2 - Coat color (Red/Black/Wild) - Pompes E7 - Horned/Polled (Celtic and Friesian) |
120,000 reads per sample (based on 200X amplicon coverage rounded up) |
Specifically developed for Nexar™ instrument |
|
| Amp-Seq One industry standard Maize 1.3K panel | Maize | 1291 |
- Contains 1251 markers from Axiom_Maize600 - Contains 558 markers from Illumina MaizeSNP50 BeadChip |
250,000 reads per sample (based on 200X amplicon coverage rounded up) |
GEN-9910-384-1291/ GEN-9910-3840-1291/ GEN-9910-384N-1291/ GEN-9910-3840N-1291 |
|
| Amp-Seq One industry standard Maize 5.9K panel | Maize | 5890 |
- Contains 5574 markers from Axiom_Maize600 - Contains 2422 markers from Illumina MaizeSNP50 BeadChi |
1,100,000 reads per sample (based on 200X amplicon coverage rounded up) |
GEN-9910-3840-5890/ |
|
| Amp-Seq One industry standard bovine ISAG 0.2K panel | Bovine | 199 |
- Contains 199 SNPs from ISAG panel (parentage) |
40,000 reads per sample (based on 200X amplicon coverage rounded up) |
GEN-9910-384-5199/ GEN-9910-3840-5199/ GEN-9910-384N-5199/ GEN-9910-3840N-5199 |
|
| Pre-designed panels for Flex-Seq services | ||||||
| Flex-Seq industry standard poultry 3K panel | Poultry | 3493 |
Contains 3493 markers from Illumina Infinium XT HG_C_60K_v6 |
0.78 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard poultry 25K panel | Poultry | 25005 |
Contains 25005 markers from Illumina Infinium XT HG_C_60K_v6 |
5.56 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard porcine 3K panel | Porcine | 3005 |
Contains 3005 markers from Axiom_PigHD_v1 |
0.67 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard bovine 7K panel | Bovine | 7212 |
1.6 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard bovine 24K panel | Bovine | 24149 |
5.37 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard blueberry 22K panel | Blueberry | 21902 |
Includes markers for range of QTLs including firmness, colour, chilling requirement, flavour and size |
4.87 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard cranberry 17K panel | Cranberry | 17502 |
3.89 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard cannabis 12K panel | Cannabis | 11919 |
2.65 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard maize 28K panel | Maize | 27657 |
3.75 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard strawberry 4K panel | Strawberry | 4000 |
Contains 4000 markers from Affymetrix array IStraw90 |
0.89 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard maize 17K panel | Maize | 16882 |
3.75 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard soy 5.5K panel | Soy | 5500 |
1.22 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard cotton 3K panel | Cotton | 3000 |
0.67 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard potato 22K panel | Potato | 22000 |
Includes potato virus Y resistance and maturity |
4.89 million reads per sample (based on 200X amplicon coverage) |
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| Flex-Seq industry standard sugarcane 17K panel | Sugercane | 17344 |
3.85 million reads per sample (based on 200X amplicon coverage) |
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